PhysioBank Archive Index

This page lists all currently available databases in the PhysioBank archives, organized according to the types of signals and annotations contained in each database:

• Multi-Parameter Databases. Available signals vary, but may include ECG, continuous invasive blood pressure, respiration, oxygen saturation, and EEG, among others.
• ECG Databases. Also see Multi-Parameter Databases, most of which include ECG signals.
• Interbeat (RR) Interval Databases. These contain beat annotations obtained from ECG recordings, but the ECG signals are not available. Also see ECG Databases, most of which include beat annotations in addition to the original ECG signals.
• Gait Databases
• Neurological Databases
• Image Databases
• Synthetic Data

If you prefer, you can view separate lists of these databases organized by class:

• Class 1 (completed reference databases)
• Class 2 (archival copies of raw data that support published research, contributed by authors or journals)
• Class 3 (other contributed collections of data, including works in progress)

We make class 2 and class 3 data available via PhysioNet as a service to the research community. Contributed data are placed in classes 2 and 3 on acceptance, and may be admitted to class 1 after review and a public comment period.

On this page, listings within each group are ordered by class, and then alphabetically by the name of the database. Those designated below as core databases are available from all PhysioNet mirrors. PhysioBank has been designed so that visitors to these mirrors are redirected to the master PhysioNet server when following a link to a PhysioBank record outside of the core collection. You may not notice that any redirection has occurred unless your connection to the master server is significantly slower than your connection to the mirror.

Multi-Parameter Databases

These databases include a variety of digitized physiologic signals in each recording. Please visit the links below for details.

• [Class 1] MGH/MF Waveform Database. This is a collection of 250 recordings of 3-lead ECGs, ABP, PAP, CVP, respiration, and airway CO2 signals from patients in critical care units; some recordings include intra-cranial, left atrial, ventricular and intra-aortic pressure waveforms.
• [Class 2] Stress Recognition in Automobile Drivers. Recordings from healthy volunteers driving on a predefined route including streets and highways in and around Boston; signals recorded include ECG, EMG, galvanic skin resistance, and respiration.
• [Class 3; core] Apnea-ECG Database. This database has been assembled for the PhysioNet/Computers in Cardiology Challenge 2000. It consists of 70 ECG recordings, each typically 8 hours long, with accompanying sleep apnea annotations obtained from study of simultaneously recorded respiration signals, which are included for 8 of the recordings.
• [Class 3; core] Fantasia Database. ECG and respiration recordings, with beat annotations from 20 young and 20 elderly subjects, all healthy, in sinus rhythm during a resting state (two hours each). Half of the recordings also include (uncalibrated) continuous noninvasive blood pressure signals. A subset of these recordings posted here previously is still available.
• [Class 3] MIMIC Database. The PhysioBank archives contain 72 complete records from this database, together with periodic measurements ("numerics") for all 121 records of the database, including multiple recordings of some of the 90 subjects. The lengths of these records vary, but average about 40 hours each. The PhysioNet core collection includes records 037, 039, and 041, as well as the numerics for all 121 records; the other available records are available from the master PhysioNet server and from some mirrors.
• [Class 3] MIMIC II Database, consisting of:
  • The MIMIC II Waveform Database, a collection that currently includes 4164 records posted on PhysioNet, containing digitized signals (typically including ECG, ABP, and respiration) and time series of periodic measurements, each presenting a quasi-continuous recording of vital signs of a single patient throughout an ICU stay (typically a few days, but many are several weeks in duration); and
  • The MIMIC II Clinical Database, a collection of clinical records that accompany the records of the MIMIC II Waveform Database, containing results of laboratory tests, medications, ICD9 diagnoses, and more. Each record contains data for a single subject, and many records span multiple ICU admissions for the same subject, including available medical history between ICU stays. Portions of 60 records are currently posted. The remaining 26,588 patient records, including records from over 20,000 patients not represented in the MIMIC II Waveform Database, are available to qualified investigators under terms of a data use agreement; see this page for details.
  Both components are still growing and additional records are posted as they become available.
• [Class 3; core] MIT-BIH Polysomnographic Database. Includes new annotation files with sleep stage and apnea annotations.
  • [Class 2; core] Santa Fe Time Series Competition Data Set B (data extracted from the MIT-BIH Polysomnographic Database).
• [Class 3; core] Sleep-EDF Database. This is a collection of sleep recordings from 8 healthy subjects. Each recording contains 2 EEG signals, EOG, and an event marker, and is accompanied by a manually-scored hypnogram. Four recordings also include submental EMG, and the other four recordings also include the submental EMG envelope, oro-nasal airflow, and body temperature.
• [Class 3] Sleep Heart Health Study Polysomnography Database. This database will eventually include 1000 overnight polysomnograms collected to study the relationship of sleep disordered breathing and cardiovascular disease. Recordings include EEG, EOG, EMG, ECG, nasal airflow and respiratory effort signals, periodic measurements of SaO2 and heart rate, annotations of sleep stages, respiratory events, EEG arousals, and more. At present, one sample polysomnogram is available.
• [Class 3] St. Vincent's University Hospital / University College Dublin Sleep Apnea Database. This database contains 25 full overnight polysomnograms with simultaneous three-channel Holter ECG, from adult subjects with suspected sleep-disordered breathing.

Unless specifically noted, each recording in these databases includes one or more digitized ECG signals and a set of beat annotations.

• [Class 1; core] ANSI/AAMI EC13 Test Waveforms. These 10 short recordings are specified by the current American National Standard for testing various devices that measure heart rate.
• [Class 1; core] European ST-T Database. The creators of this database, and the European Society of Cardiology, have contributed 48 of the 90 two-hour records of this database in their entirety. The reference annotation and header files for the remaining records are also available here.
• [Class 1; core] Long-Term ST Database. The creators of this database contributed half of it to PhysioNet in 2003, and the remaining records in 2007. Each of the 86 records is 21 to 24 hours long, and contains 2 or 3 ECG signals, annotated beat-by-beat and with respect to ST episodes, rhythm changes, and signal quality changes; each record also includes ST level time series based on 16-second averages centered on each beat. Two papers describing the database (from 1996 and 2000) are available here.
• [Class 1; core] MIT-BIH Arrhythmia Database. This collection of 48 fully annotated half-hour two-lead ECGs is available here in its entirety. The MIT-BIH Arrhythmia Database Directory is also available on-line.
• [Class 1; core] MIT-BIH Noise Stress Test Database. Twelve half-hour ECG recordings and 3 half-hour recordings of noise typical in ambulatory ECG recordings. The ECG recordings were created by adding calibrated amounts of noise to clean ECG recordings from the MIT-BIH Arrhythmia Database.
• [Class 2; core] BIDMC Congestive Heart Failure Database. Long-term ECGs (about 20 hours each) from 15 subjects with severe CHF (NYHA class 3-4).
• [Class 2; core] Post-Ictal Heart Rate Oscillations in Partial Epilepsy. Seven annotated single-lead ECG recordings, with times of seizures indicated. A study of these recordings is available here.
• [Class 2; core] QT Database. Over 100 fifteen-minute two-lead ECG recordings (many excerpted from other databases), with onset, peak, and end markers for P, QRS, T, and (where present) U waves of from 30 to 50 selected beats in each recording. A paper describing this database is available here.
• [Class 3; core] AF Termination Challenge Database. This database has been compiled for the PhysioNet/Computers in Cardiology Challenge 2004. It consists of a learning set of 30 records and two test sets of 30 and 20 records. Each record contains a one-minute excerpt of a two-lead long-term ECG recording exhibiting either self-terminating or sustained atrial fibrillation; the challenge is to identify which records in the test set show self-terminating AF.
• [Class 3; core] Creighton University Ventricular Tachyarrhythmia Database. This database includes a preliminary set of beat annotations (all beats marked as normal) with additional annotations that indicate episodes of ventricular fibrillation/flutter.
• [Class 3; core] Intracardiac Atrial Fibrillation Database. A collection of high-resolution recordings from eight subjects in atrial fibrillation or flutter; each recording includes three surface ECG signals and five intracardiac signals, all simultaneously recorded.
• [Class 3] Long-Term AF Database. A set of 84 long-term (24-hour) ECG recordings of subjects with paroxysmal or sustained atrial fibrillation. Each record contains two ECG signals and a set of unaudited beat annotations. A subset of records includes manual annotations of the terminations of AF episodes with durations of at least one minute.
• [Class 3; core] MIT-BIH Atrial Fibrillation Database (including signal files not previously released). Signal files for 23 of the 25 ten-hour records are available, along with reference rhythm annotations and unaudited beat annotations for all 25 records.
• [Class 3; core] MIT-BIH ECG Compression Test Database. This database is unannotated.
• [Class 3; core] MIT-BIH Long-Term Database. Six lengthy two-lead ECG recordings and one three-lead ECG recording.
• [Class 3; core] MIT-BIH Malignant Ventricular Arrhythmia Database. This database contains rhythm and signal quality annotations only (no beat annotations).
• [Class 3; core] MIT-BIH Normal Sinus Rhythm Database (including signal files not previously released). Also available: recordings excluded from the MIT-BIH Normal Sinus Rhythm Database (because of the presence of occasional ectopic beats).
• [Class 3; core] MIT-BIH ST Change Database. This database includes beat annotations but currently no ST change annotations. The recordings are primarily from exercise stress tests and exhibit transient ST changes.
• [Class 3; core] MIT-BIH Supraventricular Arrhythmia Database. Seventy-eight half-hour ECG recordings chosen to supplement the examples of SV arrhythmias in the MIT-BIH Arrhythmia Database.
• [Class 3] Non-Invasive Fetal Electrocardiogram Database. Fifty-five recordings of maternal and maternal+fetal ECGs recorded over a 20-week period from a single subject, in EDF+ format.
• [Class 3; core] PAF Prediction Challenge Database. This database has been compiled for the PhysioNet/Computers in Cardiology Challenge 2001. It consists of 100 record sets, each including a pair of 30-minute excerpts from a long-term ECG recording. Approximately half of the subjects have PAF immediately following one of the two 30-minute excerpts; among the 50 record sets in the learning set, the PAF can be studied by referring to 5-minute ``continuation records'' that accompany each 30-minute record. In the 50 record sets belonging to the test set, the challenge is to identify which records immediately precede PAF.
• [Class 3; core] PTB Diagnostic ECG Database. This database of 549 high-resolution 15-lead ECGs (12 standard leads together with Frank XYZ leads) includes clinical summaries for each record. From one to five ECG records are available for each of the 294 subjects.
• [Class 3] St. Petersburg Institute of Cardiological Technics 12-lead Arrhythmia Database. Seventy-five half-hour recordings extracted from 32 Holter records from patients undergoing tests for coronary artery disease, with reference annotation files containing over 175,000 beat annotations in all.
• [Class 3] Sudden Cardiac Death Holter Database. This is a collection of long-term ECG recordings of patients who experienced sudden cardiac death during the recordings. Half-hour excerpts of these recordings are available as the MIT-BIH Malignant Ventricular Arrhythmia Database.
• [Class 3] T-Wave Alternans Challenge Database. This database has been compiled for the PhysioNet/Computers in Cardiology Challenge 2008. It contains 100 2-, 3-, and 12-lead ECG records sampled at 500 Hz with 16-bit resolution over a ± 32 mV range, including subjects with risk factors for sudden cardiac death as well as healthy controls and synthetic cases with calibrated amounts of T-wave alternans.

These databases contain beat annotations only; the original ECG signals are unavailable.

• [Class 2] CAST RR Interval Sub-Study Database. Beat annotation files (about 24 hours each) from 809 subjects enrolled in the Cardiac Arrhythmia Suppression Trial (CAST), a landmark NHLBI-sponsored study. For 734 subjects, separate baseline (pre-treatment) and on-therapy records are available; the database consists of 1543 records, including roughly 150 million RR interval measurements.
• [Class 2; core] Congestive Heart Failure RR Interval Database. Beat annotation files (about 24 hours each) from 29 subjects with congestive heart failure (NYHA classes 1, 2, and 3).
• [Class 2; core] Exaggerated heart rate oscillations during two meditation techniques, with additional data from spontaneously and metronomically breathing controls, and from highly trained athletes. These data include times of beat occurrence only (the original ECGs are not currently available). A paper describing these data is available here.
• [Class 2; core] Normal Sinus Rhythm RR Interval Database. Beat annotation files (about 24 hours each) from 54 subjects in normal sinus rhythm.
• [Class 2; core] Spontaneous Ventricular Tachyarrhythmia Database (Version 1.0 from Medtronic, Inc.). This database contains 135 pairs of RR interval time series, recorded by implanted cardioverter defibrillators in 78 subjects. Each series contains between 986 and 1022 RR intervals. One series of each pair includes a spontaneous episode of ventricular tachycardia (VT) or ventricular fibrillation (VF), and the other is a sample of the intrinsic (usually sinus) rhythm.

These databases contain stride interval (gait cycle duration) time series in text form (follow the links below for details).

• [Class 2; core] Gait Dynamics in Neuro-Degenerative Disease Database. A collection of 64 recordings of gait (including original foot signals) from 15 subjects with Parkinson's disease, 20 with Huntington's disease, 13 with amyotrophic lateral sclerosis, and 16 healthy controls.
• [Class 2; core] Gait in Aging and Disease Database (a "mini-collection" of data from healthy young and old volunteers, and patients with Parkinson's disease)
• [Class 2; core] Gait Maturation Database (a collection of data from healthy children ages 3-14)
• [Class 2; core] Unconstrained and Metronomic Walking Database (a collection of long-term recordings of gait dynamics from 10 healthy young volunteers)
• [Class 2] Gait in Parkinson's Disease. A collection of multichannel recordings from force sensors beneath the feet of 93 patients with Parkinson's Disease, and 73 healthy controls, collected from three studies.

• [Class 2] EEG Motor Movement/Imagery Dataset. One- and two-minute recordings of 109 volunteers performing a series of motor/imagery tasks. Each record contains 64 channels of EEG recorded using the BCI2000 system, and a set of task annotations.
• [Class 2; core] Effect of Deep Brain Stimulation on Parkinsonian Tremor (rest tremor velocity in the index finger of 16 subjects with Parkinson's disease, who receive chronic high frequency electrical deep brain stimulation)
• [Class 2; core] Noise Enhancement of Sensorimotor Function. Measurements of postural sway in 27 healthy volunteers (15 young, 12 elderly), with and without subsensory stimulation of the soles of the feet using mechanical noise.

• [Class 3; core] Samples of MR Images (magnetic resonance angiography images)

These databases contain synthetic time series with known characteristics. These data may be useful for exploring the properties of methods for time series analysis.

• [Class 2; core] Surrogate Data with Correlations, Trends, and Nonstationarities. Surrogate stationary time series with varying degrees of correlations, trends of several types, and various types of nonstationarities.

Databases of physiologic signals are also available from a few other sources. Among the best-known of these are the AHA and CSE databases. Information about these databases and others is available here.

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Updated Tuesday, 03 November 2009 at 16:13 EST